{
  "_id": "6ab392223d719c1f840915a9",
  "Package": "pvm",
  "Title": "PharmacoVigilance Methods",
  "Version": "1.0",
  "Author": "Louis Dijkstra [aut, cre], Marco Garling [ctb]",
  "Maintainer": "Louis Dijkstra <dijkstra@leibniz-bips.de>",
  "Description": "A collection of methods used in the field of\npharmacovigilance for the dectection of 'interesting'\ndrug-adverse event pairs from spontaneous reporting data.",
  "License": "GPL (>= 3)",
  "URL": "https://github.com/bips-hb/pvm",
  "BugReports": "https://github.com/bips-hb/pvm/issues",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.2",
  "Repository": "https://bips-hb.r-universe.dev",
  "Date/Publication": "2025-02-10 16:13:06 UTC",
  "RemoteUrl": "https://github.com/bips-hb/pvm",
  "RemoteRef": "HEAD",
  "RemoteSha": "4a88f65f836692f0580d1969989b266a9585cb83",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-09-23 08:41:27 UTC",
    "User": "root"
  },
  "_user": "bips-hb",
  "_type": "src",
  "_file": "pvm_1.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/32545fad93d095ef6aec119eb729fa175d66651a747dcc8a1fdd1eb60a60ea96",
  "_filesize": 214981,
  "_sha256": "32545fad93d095ef6aec119eb729fa175d66651a747dcc8a1fdd1eb60a60ea96",
  "_expires": "2027-01-01T08:47:28.000Z",
  "_created": "2026-09-23T08:41:27.000Z",
  "_published": "2026-09-23T08:47:30.383Z",
  "_jobs": [
    {
      "job": 107107954317,
      "time": 119,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "10739899861"
    },
    {
      "job": 107107954237,
      "time": 142,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "10740217043"
    },
    {
      "job": 107107954263,
      "time": 115,
      "config": "linux-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10740765432"
    },
    {
      "job": 107107954279,
      "time": 138,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10740377272"
    },
    {
      "job": 107107954352,
      "time": 106,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "10740755914"
    },
    {
      "job": 107107954266,
      "time": 281,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "10739973114"
    },
    {
      "job": 107107954260,
      "time": 117,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10740022436"
    },
    {
      "job": 107107954243,
      "time": 308,
      "config": "macos-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10740097667"
    },
    {
      "job": 107106690408,
      "time": 226,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10740311276"
    },
    {
      "job": 107107954333,
      "time": 105,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "10739982794"
    },
    {
      "job": 107107954541,
      "time": 191,
      "config": "windows-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "10740037743"
    },
    {
      "job": 107107954264,
      "time": 114,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "10740870083"
    },
    {
      "job": 107107954432,
      "time": 92,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "10741010072"
    },
    {
      "job": 107107954407,
      "time": 225,
      "config": "windows-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10740940196"
    },
    {
      "job": 107107954305,
      "time": 105,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "10739954509"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/bips-hb/actions/runs/35838113111",
  "_status": "success",
  "_upstream": "https://github.com/bips-hb/pvm",
  "_commit": {
    "id": "4a88f65f836692f0580d1969989b266a9585cb83",
    "author": "Ronja Foraita <15413913+rforaita@users.noreply.github.com>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Update README.md",
    "time": 1739203986
  },
  "_maintainer": {
    "name": "Louis Dijkstra",
    "email": "dijkstra@leibniz-bips.de",
    "login": "louisdijkstra",
    "description": "",
    "uuid": 752831
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.2.3",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "glmnet",
      "role": "Imports"
    },
    {
      "package": "MCMCpack",
      "role": "Imports"
    },
    {
      "package": "Rcpp",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    }
  ],
  "_owner": "bips-hb",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_topics": [
    "pharmacovigilance",
    "cpp"
  ],
  "_stars": 33,
  "_contributors": [
    {
      "user": "louisdijkstra",
      "count": 25,
      "uuid": 752831
    },
    {
      "user": "jemus42",
      "count": 4,
      "uuid": 1613346
    },
    {
      "user": "rforaita",
      "count": 1,
      "uuid": 15413913
    }
  ],
  "_userbio": {
    "uuid": 34575917,
    "type": "organization",
    "name": "BIPS",
    "followers": 43,
    "description": "Leibniz Institute for Prevention Research and Epidemiology"
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/pvm"
  },
  "_devurl": "https://github.com/bips-hb/pvm",
  "_searchresults": 16,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/pvm.html",
    "extra/readme.html",
    "extra/readme.md"
  ],
  "_cranurl": false,
  "_exports": [
    "BCPNN",
    "chi2Test",
    "convertRawReports2Tables",
    "createTable",
    "dbinbinom",
    "fisherExactTest",
    "fitPriorParametersGPS",
    "GPS",
    "LASSO",
    "loglikelihood2NegativeBinomial",
    "logLikelihoodRatioBinomial",
    "near",
    "PoissonTest",
    "PRR",
    "ROR",
    "RRR",
    "YulesQ"
  ],
  "_datasets": [
    {
      "name": "srdata",
      "title": "A Simulated Spontaneous Reporting System",
      "object": "srdata",
      "class": [
        "list"
      ],
      "fields": [],
      "table": false,
      "tojson": false
    }
  ],
  "_help": [
    {
      "page": "BCPNN",
      "title": "Bayesian Confidence Propagation Neural Network (BCPNN)",
      "topics": [
        "BCPNN"
      ]
    },
    {
      "page": "chi2Test",
      "title": "Chi-squared Test",
      "topics": [
        "chi2Test"
      ]
    },
    {
      "page": "convertRawReports2Tables",
      "title": "Convert Reports to 2 x 2 Tables",
      "topics": [
        "convertRawReports2Tables"
      ]
    },
    {
      "page": "convertRawReports2TablesRcpp",
      "title": "Create 2 x 2 Tables",
      "topics": [
        "convertRawReports2TablesRcpp"
      ]
    },
    {
      "page": "createTable",
      "title": "Create 2 x 2 Table",
      "topics": [
        "createTable"
      ]
    },
    {
      "page": "dbinbinom",
      "title": "Bimodal Negative Binomial",
      "topics": [
        "dbinbinom"
      ]
    },
    {
      "page": "fisherExactTest",
      "title": "Fisher's Exact Test",
      "topics": [
        "fisherExactTest"
      ]
    },
    {
      "page": "fitPriorParametersGPS",
      "title": "Prior Parameter Fit for the GPS",
      "topics": [
        "fitPriorParametersGPS"
      ]
    },
    {
      "page": "GPS",
      "title": "Gamma Poisson Shrinker (GPS)",
      "topics": [
        "GPS"
      ]
    },
    {
      "page": "LASSO",
      "title": "LASSO",
      "topics": [
        "LASSO"
      ]
    },
    {
      "page": "loglikelihood2NegativeBinomial",
      "title": "Log-Likelihood of the Bimodal Negative Binomial",
      "topics": [
        "loglikelihood2NegativeBinomial"
      ]
    },
    {
      "page": "logLikelihoodRatioBinomial",
      "title": "Binomial Log-Likelihood Ratio Test",
      "topics": [
        "logLikelihoodRatioBinomial"
      ]
    },
    {
      "page": "near",
      "title": "near",
      "topics": [
        "near"
      ]
    },
    {
      "page": "PoissonTest",
      "title": "Test of the Poisson Mean",
      "topics": [
        "PoissonTest"
      ]
    },
    {
      "page": "PRR",
      "title": "Proportional Reporting Rate (PRR)",
      "topics": [
        "PRR"
      ]
    },
    {
      "page": "ROR",
      "title": "Reporting Odds Ratio (ROR)",
      "topics": [
        "ROR"
      ]
    },
    {
      "page": "RRR",
      "title": "Relative Reporting Risk (RRR)",
      "topics": [
        "RRR"
      ]
    },
    {
      "page": "srdata",
      "title": "A Simulated Spontaneous Reporting System",
      "topics": [
        "srdata"
      ]
    },
    {
      "page": "YulesQ",
      "title": "Yule's Q",
      "topics": [
        "YulesQ"
      ]
    }
  ],
  "_readme": "https://github.com/bips-hb/pvm/raw/HEAD/README.md",
  "_rundeps": [
    "coda",
    "codetools",
    "foreach",
    "glmnet",
    "iterators",
    "lattice",
    "MASS",
    "Matrix",
    "MatrixModels",
    "mcmc",
    "MCMCpack",
    "quantreg",
    "Rcpp",
    "RcppEigen",
    "shape",
    "SparseM",
    "survival"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "16-20260322-1ubuntu1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_score": 3.722633922533812,
  "_indexed": true,
  "_nocasepkg": "pvm",
  "_universes": [
    "bips-hb",
    "louisdijkstra"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0",
      "date": "2026-09-23T08:43:25.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "4a88f65f836692f0580d1969989b266a9585cb83",
      "fileid": "https://r2.ropensci.org/ad9f41991f4a93b54ea15c2193663979796debabcfa2c4208dbba0b3f3b35e1f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bips-hb/actions/runs/35838113111"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0",
      "date": "2026-09-23T08:43:37.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "4a88f65f836692f0580d1969989b266a9585cb83",
      "fileid": "https://r2.ropensci.org/419981d3267eaaee54111ec49097d069d89d45d02baf899e2ec6c6b9229b43ef",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bips-hb/actions/runs/35838113111"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.0",
      "date": "2026-09-23T08:43:23.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "4a88f65f836692f0580d1969989b266a9585cb83",
      "fileid": "https://r2.ropensci.org/cc03e12a7de252fba8054a493b55a6c82347a3a105a4a47baff5190b1400dadd",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bips-hb/actions/runs/35838113111"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.0",
      "date": "2026-09-23T08:43:32.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "4a88f65f836692f0580d1969989b266a9585cb83",
      "fileid": "https://r2.ropensci.org/44072882823f35fc60b15cf7018d083eaa8b5e52675f03acdf465989479bf827",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bips-hb/actions/runs/35838113111"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0",
      "date": "2026-09-23T08:43:13.000Z",
      "arch": "aarch64",
      "commit": "4a88f65f836692f0580d1969989b266a9585cb83",
      "fileid": "https://r2.ropensci.org/ad33cf52053dc43b2db892ec73d2eac642aa805036fb6212098bf767984a57d8",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bips-hb/actions/runs/35838113111"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0",
      "date": "2026-09-23T08:45:29.000Z",
      "arch": "x86_64",
      "commit": "4a88f65f836692f0580d1969989b266a9585cb83",
      "fileid": "https://r2.ropensci.org/1d84075bdc36f7735ef7d5580950351843595f5422f503c52cb599f496b1766b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bips-hb/actions/runs/35838113111"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.0",
      "date": "2026-09-23T08:43:06.000Z",
      "arch": "aarch64",
      "commit": "4a88f65f836692f0580d1969989b266a9585cb83",
      "fileid": "https://r2.ropensci.org/be02627480d59feeff454d224603a189d5670310602a5d81e549cb884bb6cec1",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bips-hb/actions/runs/35838113111"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.0",
      "date": "2026-09-23T08:45:54.000Z",
      "arch": "x86_64",
      "commit": "4a88f65f836692f0580d1969989b266a9585cb83",
      "fileid": "https://r2.ropensci.org/ed384852dba6ed31dbdf2f0ddf99eaafbea15c72817fd5e5d2cbc5c2247afb4c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bips-hb/actions/runs/35838113111"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0",
      "date": "2026-09-23T08:43:32.000Z",
      "arch": "emscripten",
      "commit": "4a88f65f836692f0580d1969989b266a9585cb83",
      "fileid": "https://r2.ropensci.org/1ea8272bd497f2474d1259a7d157b2d865825940e344f14822caaea5c73ca0d4",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bips-hb/actions/runs/35838113111"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0",
      "date": "2026-09-23T08:44:23.000Z",
      "arch": "aarch64",
      "commit": "4a88f65f836692f0580d1969989b266a9585cb83",
      "fileid": "https://r2.ropensci.org/8fcecd0d3b34e93306c289c4d68186e1a512021c433511a960ab0966af2b4d3c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bips-hb/actions/runs/35838113111"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0",
      "date": "2026-09-23T08:42:33.000Z",
      "arch": "x86_64",
      "commit": "4a88f65f836692f0580d1969989b266a9585cb83",
      "fileid": "https://r2.ropensci.org/ad15d058d20f4bb3e72457af069620b88785bef1d488d9b2b5da3bca74c25ae9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bips-hb/actions/runs/35838113111"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.0",
      "date": "2026-09-23T08:42:37.000Z",
      "arch": "x86_64",
      "commit": "4a88f65f836692f0580d1969989b266a9585cb83",
      "fileid": "https://r2.ropensci.org/8bd5975b5e2fe127e9f66903bb950bf6cfbe2eea876870736332c142a5287e9c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bips-hb/actions/runs/35838113111"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.0",
      "date": "2026-09-23T08:44:55.000Z",
      "arch": "aarch64",
      "commit": "4a88f65f836692f0580d1969989b266a9585cb83",
      "fileid": "https://r2.ropensci.org/e6a991fd0c472d3ecc0df742aa9292f492e317a5203e29f0663d08811d19ce77",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bips-hb/actions/runs/35838113111"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.0",
      "date": "2026-09-23T08:42:33.000Z",
      "arch": "x86_64",
      "commit": "4a88f65f836692f0580d1969989b266a9585cb83",
      "fileid": "https://r2.ropensci.org/0a1412b9e14c9b9a002b0c9100226651202af1d7ed12148e98616cd0ee0b3915",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bips-hb/actions/runs/35838113111"
    }
  ]
}